The detailed information of tRNA gene sequence


Sequence ID>SRA1010426
Genome IDSRR020492.52777
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 107
End posion on genome 33
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgtagcgaac
tRNA gene sequence 
GGGCCCGTAGCTCAGTTGGTTAGAGCATCCGACTCATAATCGGCAGGTCGAAGGTTCAAG
TCCTTCCGGGCCCACtc
Downstream region at tRNA end position 
gaaaagaatc
Secondary structure (Cloverleaf model)
>SRA1010426	Met	CAT
                   c      ACtc gaaaagaatc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C T T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    T   C
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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