The detailed information of tRNA gene sequence


Sequence ID>SRA1010430
Genome IDSRR020492.53721
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 208
End posion on genome 123
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttctgtagtt
tRNA gene sequence 
GCAGAGGTCGCCTAGCCCGGTATGGCGCCGGCCTTGAAAGCCGGTGAGCACTGCTCCCGG
GGGTTCAAATCCCTCCCTCTGCGCCA
Downstream region at tRNA end position 
ttgtgtaatc
Secondary structure (Cloverleaf model)
>SRA1010430	Ser	TGA
                   t      GCCA ttgtgtaatc
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        C      | + | | |     A
    C       T C C G       G G G G G     C
    C         | | |                 T T
    G       T G G C
      G T A        G     TGAGCACTGCTCCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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