The detailed information of tRNA gene sequence


Sequence ID>SRA1010431
Genome IDSRR020492.53871
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 176
End posion on genome 87
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aatgggttgt
tRNA gene sequence 
GGAAAGGTGACCGAGTGGCCGAAGGTGCGTGACTGGAAATCACGTGTACGGGCAACCGTA
CCGAGGGTTCGAATCCCTCCCTTTCCGCCA
Downstream region at tRNA end position 
gcaacccctc
Secondary structure (Cloverleaf model)
>SRA1010431	Ser	GGA
                   t      GCCA gcaacccctc
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTACGGGCAACCGTACC
                    C - G
                    G - C
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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