The detailed information of tRNA gene sequence


Sequence ID>SRA1010446
Genome IDSRR020492.58148
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 62
End posion on genome 140
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aagaaaattT
tRNA gene sequence 
GGATCCGTCGTCTAGCTTGGTTTGGATGCCGCACTCACACTGCGGAGGTCAAGGGTTCAA
ATCCCTTCGGATCCATCA
Downstream region at tRNA end position 
tcatacttga
Secondary structure (Cloverleaf model)
>SRA1010446	Val	CAC
                   T      ATCA tcatacttga
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     C - G
                     G - C          T A
                    T     T T C C C     A
    T C G A        C      | | | | |     A
  T         T C T G       A A G G G     C
  G         + | | +                 T T
  G         G G A T
    T T T          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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