The detailed information of tRNA gene sequence


Sequence ID>SRA1010457
Genome IDSRR020492.61510
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 101
End posion on genome 176
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gtttgttatT
tRNA gene sequence 
GGGCCGGTCGTCTAGACTGGTAGGATACGCCCTTGGCATGGGTGAGATCGAGGGTTCAAA
TCCCTCCCGGTCCATta
Downstream region at tRNA end position 
aattttcttt
Secondary structure (Cloverleaf model)
>SRA1010457	Ala	GGC
                   T      ATta aattttcttt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        C      | | | | |     A
    C       T C T G       G A G G G     C
    T       + | | +                 T T
    G       G G A T
      G T A        A     AGATC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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