The detailed information of tRNA gene sequence


Sequence ID>SRA1010523
Genome IDSRR020492.83212
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 65
End posion on genome 141
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgatcgtcct
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGCTAGAGCTCCCGGCTCATAACCGGGCGGTCGGAGGTTCAAG
TCCTCCTGGGCCCACCA
Downstream region at tRNA end position 
aaaatataat
Secondary structure (Cloverleaf model)
>SRA1010523	Met	CAT
                   t      ACCA aaaatataat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     C C T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        T     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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