The detailed information of tRNA gene sequence


Sequence ID>SRA1010527
Genome IDSRR020492.84412
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 200
End posion on genome 127
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tgtcgacaca
tRNA gene sequence 
GGGAACGTAGTCTAGCTTGGTATGATTCGGGCTTTGGGTGCCTGAGGTCGCAGGTTCGAA
TCCTGCCGTTCCCAtct
Downstream region at tRNA end position 
atatttttaa
Secondary structure (Cloverleaf model)
>SRA1010527	Pro	TGG
                   a      Atct atatttttaa
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     C - G
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | | | | |     G
    T       T C T G       G C A G G     C
    T         | | +                 T T
    G       T G A T
      G T A        T     AGGTC
                    C - G
                    G + T
                    G - C
                    G - C
                    C - G
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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