The detailed information of tRNA gene sequence


Sequence ID>SRA1010528
Genome IDSRR020492.84975
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 164
End posion on genome 240
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcctcgctcc
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCGGGTTCGAA
TCCCGCCCCCGCTACCA
Downstream region at tRNA end position 
agcagannnn
Secondary structure (Cloverleaf model)
>SRA1010528	Met	CAT
                   c      ACCA agcagannnn
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    C       C G A G       G C G G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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