The detailed information of tRNA gene sequence


Sequence ID>SRA1010533
Genome IDSRR020492.86610
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 146
End posion on genome 73
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
tcatttcgag
tRNA gene sequence 
GCGGGTGTCGCCAAGTGGTTAAGGCAGCGGCTTGTGGTGCCGCCATCCGGGGGTTCGAAT
CCCCTCATCCGCCCtc
Downstream region at tRNA end position 
aaattctttt
Secondary structure (Cloverleaf model)
>SRA1010533	His	GTG
                   g      CCtc aaattctttt
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     T - A
                     G - C          T A
                    T     T C C C C     A
      T G A        C      + | | | |     G
    G       A C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T A          A     CATCC
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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