The detailed information of tRNA gene sequence


Sequence ID>SRA1010537
Genome IDSRR020492.87657
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 244
End posion on genome 169
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gtttttacaa
tRNA gene sequence 
GCTCCTGTGGTGTAGTCCGGCCAAGCATATTGGCTTCTCAAGCCAATGATCTCGGGTTCA
AATCCCGACGGGAGCAttt
Downstream region at tRNA end position 
tcctttcaat
Secondary structure (Cloverleaf model)
>SRA1010537	Glu	CTC
                   a      Attt tcctttcaat
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     A G C C C     A
    C T G A        G      | | | | |     A
  C         T G T G       T C G G G     C
  G         + | | +                 T T
  G         G C A T
    C C A A        A     TGATC
                    T - A
                    T - A
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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