The detailed information of tRNA gene sequence


Sequence ID>SRA1010588
Genome IDSRR020492.107283
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 71
End posion on genome 146
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cagggataat
tRNA gene sequence 
AGGAGTGTAGCTCAATTGGCAGAGCACCGGTCTCCAAAACCGGGGGTTGCGGGTTCGAGT
CCCTCCACTCCTGCCA
Downstream region at tRNA end position 
gagtattata
Secondary structure (Cloverleaf model)
>SRA1010588	Trp	CCA
                   t      GCCA gagtattata
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T A A        A      |   | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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