The detailed information of tRNA gene sequence


Sequence ID>SRA1010608
Genome IDSRR020492.112808
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 153
End posion on genome 79
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttattgatac
tRNA gene sequence 
GGTGAGGTAGTACAGTCCGGCAGTGCGTGGGCCTGCAAAGCCCGAAGTCGAGAGTTCAAA
TCTCTCCCTCACCTCtt
Downstream region at tRNA end position 
tgatcctggt
Secondary structure (Cloverleaf model)
>SRA1010608	Cys	GCA
                   c      TCtt tgatcctggt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
      T G A        A      | | | | |     A
    C       C A T G       G A G A G     C
    C       | | + |                 T T
    G       G T G C
      G C A        G     AAGTC
                    T + G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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