The detailed information of tRNA gene sequence


Sequence ID>SRA1010609
Genome IDSRR020492.112850
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 151
End posion on genome 75
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
accataatat
tRNA gene sequence 
CGAGGCGTAGCGCAGTCCGGTAGCGCACTGCGTTCGGAACGCAGGGGTCGGAGGTTCAAA
TCCTCTCGCCTCGACAA
Downstream region at tRNA end position 
tggtacaatc
Secondary structure (Cloverleaf model)
>SRA1010609	Pro	CGG
                   t      ACAA tggtacaatc
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      T G A        A      + | | | |     A
    C       C G C G       G G A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       A
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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