The detailed information of tRNA gene sequence


Sequence ID>SRA1010610
Genome IDSRR020492.112908
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 124
End posion on genome 36
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ataggatcac
tRNA gene sequence 
GGAGGGGTGGCTGAGCGGTCGAAAGCACCGGTCTTGAAAACCGGCGACGTTAATAGCGTC
CTAGGGTTCGAATCCCTACCCCTCCGCCA
Downstream region at tRNA end position 
aatattcgaa
Secondary structure (Cloverleaf model)
>SRA1010610	Ser	TGA
                   c      GCCA aatattcgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     A T C C C     A
      C G A        G      | | | | |     G
    G       G T C G       T A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        A     CGACGTTAATAGCGTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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