The detailed information of tRNA gene sequence


Sequence ID>SRA1010640
Genome IDSRR020492.124124
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 124
End posion on genome 48
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gattaacgat
tRNA gene sequence 
CGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCTGGTTCAAA
TCCAGCCCCCGCTACAA
Downstream region at tRNA end position 
tgaaaacccg
Secondary structure (Cloverleaf model)
>SRA1010640	Met	CAT
                   t      ACAA tgaaaacccg
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      T G A        A      | | | | |     A
    C       C G A G       G C T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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