The detailed information of tRNA gene sequence


Sequence ID>SRA1010642
Genome IDSRR020492.125088
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 109
End posion on genome 184
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cccatgtttt
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGTAGAGCATCTCGTTTACACCGAGGGGGTCAAAGGTTCGAGT
CCTTTACCGCCCACCA
Downstream region at tRNA end position 
aaaaaagggg
Secondary structure (Cloverleaf model)
>SRA1010642	Val	TAC
                   t      ACCA aaaaaagggg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T G
                    T     T T T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A A A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T + G
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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