The detailed information of tRNA gene sequence


Sequence ID>SRA1010645
Genome IDSRR020492.125477
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 60
End posion on genome 149
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcaaccacga
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGCTGAAGGCGCACGCTTGGAAAGCGTGTATACGGGAAACCGTA
TCGAGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
ttttacctaa
Secondary structure (Cloverleaf model)
>SRA1010645	Ser	GGA
                   a      GCCA ttttacctaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGGGAAACCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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