The detailed information of tRNA gene sequence


Sequence ID>SRA1010661
Genome IDSRR020492.133430
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 190
End posion on genome 101
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tatttattta
tRNA gene sequence 
GGACAGGTGTCAGAGTGGTCGATTGTGCATCCTTGGAAAGGATGTGTTCTAGCAATAGAA
CCGGGAGTTCGAATCTCCCCCTGTCCGCCA
Downstream region at tRNA end position 
ttttatttat
Secondary structure (Cloverleaf model)
>SRA1010661	Ser	GGA
                   a      GCCA ttttatttat
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      T G A        G      | | | | |     G
    G       G A C T       G G G A G     C
    G       + | |                   T T
    T       T T G T
      C G A        G     TGTTCTAGCAATAGAACC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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