The detailed information of tRNA gene sequence


Sequence ID>SRA1010682
Genome IDSRR020492.139320
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 198
End posion on genome 120
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
aaaaataatT
tRNA gene sequence 
CGGGGAGTAGCGCAGCCAGGTAGCGCACTACGCTGGGGGTGTAGGGGTCAGAGGTTCAAA
TCCTCTCTTCCCGAACC
Downstream region at tRNA end position 
Aaaaaatata
Secondary structure (Cloverleaf model)
>SRA1010682	Pro	GGG
                   T      AACC Aaaaaatata
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     A - T
                     G - C          T A
                    T     T C T C C     A
      C G A        A      | | | | |     A
    C       C G C G       A G A G G     C
    A       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G + T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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