The detailed information of tRNA gene sequence


Sequence ID>SRA1010694
Genome IDSRR020492.142151
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 156
End posion on genome 67
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taacttattc
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTTTAAGGCGCACGCTTGGAAAGCGTGTATACTGTTAAAGGTA
TCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
ttaatttacc
Secondary structure (Cloverleaf model)
>SRA1010694	Ser	GGA
                   c      GCCA ttaatttacc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TATACTGTTAAAGGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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