The detailed information of tRNA gene sequence


Sequence ID>SRA1010750
Genome IDSRR020492.163425
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 39
End posion on genome 115
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tatagcgagG
tRNA gene sequence 
GGGCGTGTAGCTCAGTTGGGAGAGCACCTGGTTTGCAACCAGGAGGTCACCGGTTCGAAC
CCGGTCAGCTCCACCA
Downstream region at tRNA end position 
tttggcgaga
Secondary structure (Cloverleaf model)
>SRA1010750	Ala	TGC
                   G      ACCA tttggcgaga
                     G - C
                     G - C
                     G + T
                     C   C
                     G   G
                     T - A
                     G - C          C A
                    T     T G G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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