The detailed information of tRNA gene sequence


Sequence ID>SRA1010789
Genome IDSRR020492.172201
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 169
End posion on genome 255
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aattgcttta
tRNA gene sequence 
GGAGGGGTGGCAGAGCCTGGCTGATTGCACTGGTCTTGAAAACCAGCATACCGTAAGGTA
TCGGGGGTTCGAATCCCTCCCCCTCCGnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1010789	Ser	TGA
                   a      Gnnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C C G A        G      | + | | |     G
  T         G A C G       G G G G G     C
  G         + | | |                 T T
  G         T T G C
    C T G A        A     CATACCGTAAGGTATC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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