The detailed information of tRNA gene sequence


Sequence ID>SRA1010796
Genome IDSRR020492.173978
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 104
End posion on genome 179
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ataaaattct
tRNA gene sequence 
GGGGGATTAGCTCAGCTGGGAGAGCGCCTGATTTGCATTCAGGAGGTCAGCGGTTCGATC
CCGNTATCCTCCACAA
Downstream region at tRNA end position 
gaacacttag
Secondary structure (Cloverleaf model)
>SRA1010796	Ala	TGC
                   t      ACAA gaacacttag
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     T - A          C T
                    T     T N G C C     A
      C G A        A      |   | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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