The detailed information of tRNA gene sequence


Sequence ID>SRA1010805
Genome IDSRR020492.177072
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 112
End posion on genome 185
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tatataatat
tRNA gene sequence 
GGCTCGGTGGCAGAGTGGTTATGTAGGGGCCTGCAAAGCCTTGCACAGCGGTTCGATTCC
GCTCCGAGCCTCCA
Downstream region at tRNA end position 
atttattctt
Secondary structure (Cloverleaf model)
>SRA1010805	Cys	GCA
                   t      TCCA atttattctt
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          T T
                    T     T C G C C     A
        G A        G      | | | | |     G
      T     G A C G       A G C G G     C
      G       | | +                 T T
      G     A T G T
        T T        A     GCAC
                    G + T
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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