The detailed information of tRNA gene sequence


Sequence ID>SRA1010811
Genome IDSRR020492.180501
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 189
End posion on genome 100
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aatctgcagc
tRNA gene sequence 
GGAGAGGTGACCGAGTGGCCGATGGTGCGTGATTGGAAATCACGTGTGCGGGCAACCGTA
CCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
cattcttaaa
Secondary structure (Cloverleaf model)
>SRA1010811	Ser	GGA
                   c      GCCA cattcttaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G       + | | |                 T T
    C       T G G T
      C G A        G     TGTGCGGGCAACCGTACC
                    C - G
                    G - C
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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