The detailed information of tRNA gene sequence


Sequence ID>SRA1010815
Genome IDSRR020492.181788
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 193
End posion on genome 101
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttgggcgtc
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGCTGAAGGCGCACGCTTGGAAAGCGTGTATAGGGTTTATAGCT
CTATCGAGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
aatccctaga
Secondary structure (Cloverleaf model)
>SRA1010815	Ser	GGA
                   c      GCCA aatccctaga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATAGGGTTTATAGCTCTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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