The detailed information of tRNA gene sequence


Sequence ID>SRA1010821
Genome IDSRR020492.184539
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 84
End posion on genome 160
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position
gcagcctcgc
tRNA gene sequence
GGGCCTGTAGCTTAGCTAGGTAGAGCGTCCGGCTCTTAACCGGACGGCCATGGGTTCGAA
TCCCTTCAGGCCCGCCA
Downstream region at tRNA end position
tgcctatctg
Secondary structure (Cloverleaf model)
>SRA1010821	Lys	CTT
                   c      GCCA tgcctatctg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T T C C C     A
      C G A        A      |   | | |     G
    T       T T C G       A T G G G     C
    A       + | | |                 T T
    G       G A G C
      G T A        G     CGGCC
                    T - A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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