The detailed information of tRNA gene sequence


Sequence ID>SRA1010822
Genome IDSRR020492.184621
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 113
End posion on genome 189
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ctagaacgcc
tRNA gene sequence 
GGAGCGGTAGTTCAGTTGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCAAG
TCCCGTCCGCTCCGCCA
Downstream region at tRNA end position 
tttacttgaa
Secondary structure (Cloverleaf model)
>SRA1010822	Asp	GTC
                   c      GCCA tttacttgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     A
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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