The detailed information of tRNA gene sequence


Sequence ID>SRA1010827
Genome IDSRR020492.185733
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 29
End posion on genome 106
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cacacaatgc
tRNA gene sequence 
AGGAGCGTAGCTCAGTCTGGCCAGAGCGCTGGTCTCCAAAACCAGTGGCCGGGGGTTCGA
ATCCTCCCGCTCCTGCCA
Downstream region at tRNA end position 
attttaggca
Secondary structure (Cloverleaf model)
>SRA1010827	Trp	CCA
                   c      GCCA attttaggca
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C C T C C     A
    C T G A        A      | | + | |     G
  T         C T C G       G G G G G     C
  G         | | | |                 T T
  G         G A G C
    C C A          G     TGGCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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