The detailed information of tRNA gene sequence


Sequence ID>SRA1010851
Genome IDSRR020492.193710
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 239
End posion on genome 164
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aatcgttgat
tRNA gene sequence 
AGGGGTATAGCTCAGCTGGTAGAGCGTCGGTCTCCAAAACCGAAGGTCCCGGGTTCGAGC
CCTGGTGCCCCTGCCA
Downstream region at tRNA end position 
ccttcccttg
Secondary structure (Cloverleaf model)
>SRA1010851	Trp	CCA
                   t      GCCA ccttcccttg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          C G
                    T     G G T C C     A
      C G A        A      | | + | |     G
    T       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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