The detailed information of tRNA gene sequence


Sequence ID>SRA1010853
Genome IDSRR020492.194456
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 110
End posion on genome 201
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aacccctgta
tRNA gene sequence 
GGAAAGGTGGCTGAGCTCGGTTTAAAGCACTGGTCTTGAAAACCAGCAATGGGGCAACTC
ATTCGTGGGTTCGAATCCCACCCTTTCCGCCA
Downstream region at tRNA end position 
aaaatatatt
Secondary structure (Cloverleaf model)
>SRA1010853	Ser	TGA
                   a      GCCA aaaatatatt
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T C G A        G      | | | | |     G
  C         G T C G       G T G G G     C
  G           | | |                 T T
  G         A A G C
    T T T A        A     CAATGGGGCAACTCATTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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