The detailed information of tRNA gene sequence


Sequence ID>SRA1010856
Genome IDSRR020492.195621
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 131
End posion on genome 226
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position
agtaaaattt
tRNA gene sequence
GGGAATGATTGAGTAGCTGGTGCTCTCCGCGGCCTTCAAAGCCGTTGTCCCCGGTATTCC
CGGGGAGCTGGGTTCGATTCCCAGGCGTTCCCGCCA
Downstream region at tRNA end position
tttagcaaat
Secondary structure (Cloverleaf model)
>SRA1010856	SeC	TCA
                   t      GCCA tttagcaaat
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T + G
                     G - C
                     A   G          T T
                    T     G A C C C     A
      C G A        T      | | | | |     G
    T       T G A G       C T G G G     C
    G         | | |                 T T
    G       T C T C
      T G C        C     TGTCCCCGGTATTCCCGGGGAG
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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