The detailed information of tRNA gene sequence


Sequence ID>SRA1010857
Genome IDSRR020492.196052
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 235
End posion on genome 163
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tattgaacat
tRNA gene sequence 
GGCCCCATCGTCTAGCGGTTAGGACGCTGGCCTCTCACGCCGGAAACAGGGGTTCGATTC
CCCTTGGGGCTACtc
Downstream region at tRNA end position 
ttttcaatag
Secondary structure (Cloverleaf model)
>SRA1010857	Glu	CTC
                   t      ACtc ttttcaatag
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     T C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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