The detailed information of tRNA gene sequence


Sequence ID>SRA1010878
Genome IDSRR020492.200385
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 149
End posion on genome 235
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
tttcgaaatc
tRNA gene sequence 
GCGAAAGTGGCGGAATTGGTAGACGCGCAAGGTTCAGGTCCTTGTGTCCGCAAGGACGTC
GGGGTTCGAGTCCCCGCTTTCGCACCA
Downstream region at tRNA end position 
tcggacattt
Secondary structure (Cloverleaf model)
>SRA1010878	Leu	CAG
                   c      ACCA tcggacattt
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C          T G
                    T     G C C C C     A
      T A A        G      | | | | |     G
    T       G G C G       C G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGTCCGCAAGGACGT
                    C - G
                    A - T
                    A - T
                    G - C
                    G - C
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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