The detailed information of tRNA gene sequence


Sequence ID>SRA1010880
Genome IDSRR020492.201624
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 104
End posion on genome 178
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tcatatttta
tRNA gene sequence 
GGGTTTGTAGCTCAGTCGGTTAGAGCACCGCTCTGATAAGGCGGGGGTCGGTAGTTCGAG
TCTACCCAGACCCACtt
Downstream region at tRNA end position 
tgagagttat
Secondary structure (Cloverleaf model)
>SRA1010880	Ile	GAT
                   a      ACtt tgagagttat
                     G - C
                     G - C
                     G - C
                     T - A
                     T + G
                     T - A
                     G - C          T G
                    T     C C A T C     A
      T G A        A      | | | | |     G
    C       C T C G       G G T A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    T + G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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