The detailed information of tRNA gene sequence


Sequence ID>SRA1010888
Genome IDSRR020492.203715
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 17
End posion on genome 105
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
attcctatcc
tRNA gene sequence 
GGAGAGGTGTCTGAGTGGTTTAAGGTGATAGACTCGAAATCTATTGTACGTTCTGCGTAC
CGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ttaaactaaa
Secondary structure (Cloverleaf model)
>SRA1010888	Ser	CGA
                   c      GCCA ttaaactaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G T C T       G G G G G     C
    G         + |                   T T
    T       A G G T
      T T A        G     TGTACGTTCTGCGTACC
                    A - T
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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