The detailed information of tRNA gene sequence


Sequence ID>SRA1010906
Genome IDSRR020492.210048
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 181
End posion on genome 264
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cttcacatga
tRNA gene sequence 
GCGGGGATCGCCTAGCCTGGTAGGGCGTGGGATTGCTAATCCCATGTTCGCAAGAACTCG
GGGGTTCAAATCCCTCTCCCCGCGnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1010906	Ser	GCT
                   a      Gnnn nnnnnnnnnn
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        C      | + | | |     A
    C       T C C G       G G G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGTTCGCAAGAACTC
                    T - A
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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