The detailed information of tRNA gene sequence


Sequence ID>SRA1010925
Genome IDSRR020492.217787
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 144
End posion on genome 218
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cgttcccaac
tRNA gene sequence 
GGCCCGTTCGTCTATCGGCTAGGACACAGCCCTCTCAAGGCTGAGAGAGGGGTTCGATTC
CCCTACGGGCTACCA
Downstream region at tRNA end position 
gcttgggaaa
Secondary structure (Cloverleaf model)
>SRA1010925	Glu	CTC
                   c      ACCA gcttgggaaa
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      T A          A     AGAG
                    C - G
                    A - T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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