The detailed information of tRNA gene sequence


Sequence ID>SRA1010930
Genome IDSRR020492.218583
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 223
End posion on genome 136
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tgttgtatta
tRNA gene sequence 
TGAGGGGTGGGAGAGTGGTTAAATCCACCAGACTGTAAATCTGGCGCTCTGAGGGCTACA
CTGGTTCGAATCCAGTCCCCCTCCACC
Downstream region at tRNA end position 
Aaataagagt
Secondary structure (Cloverleaf model)
>SRA1010930	Tyr	GTA
                   a      CACC Aaataagagt
                     T   C
                     G + T
                     A   C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G A C C     A
      T G A        G      | | | | |     G
    G       G A G G       A C T G G     C
    G         | | |                 T T
    T       A T C C
      T A A        A     CGCTCTGAGGGCTAC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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