The detailed information of tRNA gene sequence


Sequence ID>SRA1010931
Genome IDSRR020492.218583
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 91
End posion on genome 15
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ttaatctcag
tRNA gene sequence 
GCCCACATAGCCTCAGCCGGCAGAGCACGTTCTTGGTAAGAACGAGGTCAGCAGTTCGAG
TCTGCTTGTGGGCTCCA
Downstream region at tRNA end position 
gtttatggag
Secondary structure (Cloverleaf model)
>SRA1010931	Thr	GGT
                   g      TCCA gtttatggag
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     C - G
                     A - T          T G
                    T     T C G T C     A
      G A C        A      | | | | |     G
    C       T C C G       A G C A G     C
    C       +   | |                 T T
    G       G A G C
      G C A        A     AGGTC
                    C - G
                    G - C
                    T - A
                    T - A
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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