The detailed information of tRNA gene sequence


Sequence ID>SRA1010935
Genome IDSRR020492.219396
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 130
End posion on genome 55
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtctccaggt
tRNA gene sequence 
GGCACCGTAGCTCAGTGGTTAGAGCGGGCGCTTCATAAGCGCTAGGTCACTGGTTCGAAC
CCAGTCGGTGCCACCA
Downstream region at tRNA end position 
tttgacaatt
Secondary structure (Cloverleaf model)
>SRA1010935	Met	CAT
                   t      ACCA tttgacaatt
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     G - C          C A
                    T     T G A C C     A
      T G A        A      | | | | |     G
    G       C T C G       A C T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     AGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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