The detailed information of tRNA gene sequence


Sequence ID>SRA1010943
Genome IDSRR020492.223424
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 128
End posion on genome 204
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaactacgtt
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCAGTGGACTCATAATCCATTGGTCGAAGGTTCGAG
TCCTTCCGGGCCCACCA
Downstream region at tRNA end position 
tcttttcaat
Secondary structure (Cloverleaf model)
>SRA1010943	Met	CAT
                   t      ACCA tcttttcaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C T T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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