The detailed information of tRNA gene sequence


Sequence ID>SRA1010949
Genome IDSRR020492.227019
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 12
End posion on genome 87
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tgaagcgtct
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCAGGGGTTCGAAT
CCCCTCAGCTCCACCA
Downstream region at tRNA end position 
ccttttcaga
Secondary structure (Cloverleaf model)
>SRA1010949	Ala	TGC
                   t      ACCA ccttttcaga
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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