The detailed information of tRNA gene sequence


Sequence ID>SRA1010978
Genome IDSRR020492.237161
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 206
End posion on genome 131
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gtttctataa
tRNA gene sequence 
GCTCCTGTGGTGTAGTCCGGCCAAGCATACTGGCTTCTCAAGCCAGTGATCCCGGGTTCA
AATCCCGGCGGGAGCAtat
Downstream region at tRNA end position 
tataatttaa
Secondary structure (Cloverleaf model)
>SRA1010978	Glu	CTC
                   a      Atat tataatttaa
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     G G C C C     A
    C T G A        G      | | | | |     A
  C         T G T G       C C G G G     C
  G         + | | +                 T T
  G         G C A T
    C C A A        A     TGATC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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