The detailed information of tRNA gene sequence


Sequence ID>SRA1011002
Genome IDSRR020492.246466
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 83
End posion on genome 156
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ctatttgtta
tRNA gene sequence 
GGGGATATAGCTCAGTTGGGAGAGCGCTTGAATGGCATTCAAGAGGTCAGCGGTTCGACC
CCGCTTATCTCCACat
Downstream region at tRNA end position 
atttttaatt
Secondary structure (Cloverleaf model)
>SRA1011002	Ala	GGC
                   a      ACat atttttaatt
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     A - T          C C
                    T     T C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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