The detailed information of tRNA gene sequence


Sequence ID>SRA1011003
Genome IDSRR020492.246626
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 224
End posion on genome 150
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttttttcttt
tRNA gene sequence 
GGCGTCGTACCCAAGTGGTCTAAGGGAGCAGTTTGCAAAACTGTCATTCATCGGTTCGAA
TCCGATCGACGCCTCat
Downstream region at tRNA end position 
attggcccgg
Secondary structure (Cloverleaf model)
>SRA1011003	Cys	GCA
                   t      TCat attggcccgg
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     T A G C C     A
      T G A        A      | | | | |     G
    G       A C C C       A T C G G     C
    G         | | |                 T T
    T       A G G G
      C T A        A     CATTC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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