The detailed information of tRNA gene sequence


Sequence ID>SRA1011011
Genome IDSRR020492.250237
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 224
End posion on genome 135
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
ttatcgagac
tRNA gene sequence
GGAGAGGTGGCTGAGTGGTTGAAAGCGCTCCCCTGCTAAGGGAGTATGGGCTAACACCCA
TCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position
attgcctatt
Secondary structure (Cloverleaf model)
>SRA1011011	Ser	GCT
                   c      GCCA attgcctatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TATGGGCTAACACCCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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