The detailed information of tRNA gene sequence


Sequence ID>SRA1011015
Genome IDSRR020492.252592
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 118
End posion on genome 193
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
atttattttt
tRNA gene sequence 
GGGCTTGTAGCTCAGGTTGGTTAGAGCGCATCTCTGATAAGGATGAGGTCCGTGGTTCGA
GTCCACGCAGGCCCACtt
Downstream region at tRNA end position 
gagagaggcc
Secondary structure (Cloverleaf model)
>SRA1011015	Ile	GAT
                   t      ACtt gagagaggcc
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T G
                    T     G C A C C     A
    T G G A        A      | | | | |     G
  T         C T C G       C G T G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    T + G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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