The detailed information of tRNA gene sequence


Sequence ID>SRA1011016
Genome IDSRR020492.252721
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 215
End posion on genome 126
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tccatggctc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTGAAGGCGCCGCTCTCGAAAAGCGGTATGCGGGTGACCGTA
TCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
atctagtcta
Secondary structure (Cloverleaf model)
>SRA1011016	Ser	CGA
                   c      GCCA atctagtcta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATGCGGGTGACCGTATC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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