The detailed information of tRNA gene sequence


Sequence ID>SRA1011020
Genome IDSRR020492.254230
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 92
End posion on genome 16
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agaattaaac
tRNA gene sequence 
GGCGGGATAGCTCAGTTGGTTAGAGCGTTGGACTCATAAGCCAAAGGTCGCTGGTTCGAC
TCCAGCTCCCGCTACCA
Downstream region at tRNA end position 
ttttgattga
Secondary structure (Cloverleaf model)
>SRA1011020	Met	CAT
                   c      ACCA ttttgattga
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T C
                    T     C G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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